If you adore the bright, tangy zing of lemon combined with the comforting sweetness of a cookie, then you are in for a real treat with this Lemon Bar Cookie Cups Recipe. These delightful little cups deliver the best of both worlds with a buttery, crumbly cookie base and a luscious, tart lemon filling that bakes to perfection. They are bursting with fresh citrus flavor, dusted with powdered sugar for a pretty finish, and perfectly portioned for sharing or savoring solo. Whether for a spring picnic, afternoon tea, or any time you need a cheerful dessert, these cookie cups are sure to become a fast favorite in your recipe box.

Ingredients You’ll Need
Gathering the right ingredients is half the fun, and this recipe calls for simple, everyday pantry staples that come together magically. Each component plays an essential role—rich butter for tenderness, fresh lemon juice and zest for vibrant flavor, and a precise balance of sugar and flour to create that irresistible texture.
- Unsalted butter (1 cup, softened): Provides a creamy richness and tender crumb to the cookie base.
- Granulated sugar (1 cup, divided): Sweetens the cookie and lemon filling while balancing citrus tartness.
- Large eggs (2): Bind the ingredients together and add moisture for a smooth lemon layer.
- Vanilla extract (1 teaspoon): Adds subtle warmth that complements the lemon’s brightness.
- All-purpose flour (2 cups, divided): Provides structure to both the cookie crust and lemon filling.
- Salt (1/2 teaspoon): Enhances flavors and balances sweetness perfectly.
- Fresh lemon juice (1/4 cup): The star ingredient that delivers bright, zesty freshness.
- Lemon zest (zest of 1 lemon): Intensifies the citrus aroma and flavor in every bite.
- Powdered sugar (for dusting): Adds an elegant, sweet finish that’s visually delightful.
How to Make Lemon Bar Cookie Cups Recipe
Step 1: Prepare Your Oven and Mix the Cookie Base
Start by preheating your oven to 350°F and lightly greasing a 12-cup muffin tin to prevent sticking. In a large bowl, cream together the softened butter and 3/4 cup of the granulated sugar until the mixture becomes light and fluffy. This step is key for a tender cookie base with just the right hint of sweetness.
Step 2: Add Egg, Vanilla, Flour, and Salt
Beat in one egg and the vanilla extract, which will give your cookie base a subtle depth of flavor. Then, gradually stir in 1 1/2 cups of the all-purpose flour along with the salt until everything is well combined. You’ll have a soft dough that can easily be pressed into the muffin cups.
Step 3: Form the Cookie Cups and Begin Baking
Using about a tablespoon of dough per muffin cup, firmly press the dough into the bottoms to create an even layer. This will form the sturdy cookie crust that supports the luscious lemon filling. Bake these bases for 12 minutes or until they turn a lovely light golden color—this ensures they are just baked enough to hold the filling without becoming soggy.
Step 4: Mix the Zesty Lemon Filling
While the cookie bases bake, whisk together the remaining egg, 1/4 cup sugar, remaining 1/2 cup flour, fresh lemon juice, and lemon zest until smooth. This mixture should be silky and bright, ready to set into a tangy, refreshing custard atop your cookie crust.
Step 5: Add Filling and Finish Baking
Pour the lemon mixture gently over each pre-baked cookie base, filling the muffin cups nearly to the top. Bake for an additional 15 to 18 minutes, or until the lemon filling is fully set but still slightly jiggly in the center. This timing is crucial to maintaining that perfect balance of texture between creamy and cakey.
Step 6: Cool and Dust with Powdered Sugar
Allow the cookie cups to cool completely in the pan, giving the filling time to firm up beautifully. Once cooled, dust the tops generously with powdered sugar for a sweet touch and an inviting presentation that’s hard to resist.
How to Serve Lemon Bar Cookie Cups Recipe

Garnishes
These lemon bar cookie cups are stunning on their own, but a sprinkle of fresh lemon zest or a thin twist of lemon peel adds an elegant burst of color and zesty aroma. For a special occasion, a dollop of whipped cream or a few fresh berries like raspberries or blueberries pairs wonderfully with the tart citrus.
Side Dishes
Pair your lemon bar cookie cups with a cup of herbal tea, such as chamomile or mint, which complements the bright citrus notes beautifully. They also go well alongside light fruity salads or a scoop of vanilla ice cream for a refreshing finish to any meal.
Creative Ways to Present
For gatherings or gift-giving, consider serving these cookie cups in colorful cupcake liners to add a festive touch. Arranged on a tiered dessert stand, they make a stunning centerpiece that invites everyone to indulge in their citrus bliss.
Make Ahead and Storage
Storing Leftovers
If you happen to have any leftovers (though that’s rare!), store them in an airtight container at room temperature for up to three days. For longer freshness, refrigeration will keep them delightful for up to one week without compromising flavor or texture.
Freezing
These cookie cups freeze beautifully. Place them in a single layer on a baking sheet and freeze until firm, then transfer to a freezer-safe container or bag. When wrapped well, they maintain their vibrant lemon flavor for up to two months.
Reheating
To enjoy frozen cookie cups, thaw them overnight in the fridge. You can warm them slightly in the microwave for about 15-20 seconds if you prefer a softer texture, but they’re also delicious eaten cold as a refreshing treat.
FAQs
Can I use bottled lemon juice instead of fresh lemon juice?
For the brightest and most authentic flavor, fresh lemon juice is your best bet in this Lemon Bar Cookie Cups Recipe. Bottled juice often lacks the vibrant zestiness that fresh lemons bring, which could make the filling taste flat.
What if I don’t have a muffin tin?
If you don’t have a muffin tin, you can use a mini tart pan or even a small square baking dish and cut the finished dessert into portions. Keep in mind the baking times may vary slightly.
How can I make these gluten-free?
Substitute the all-purpose flour with a gluten-free baking blend that measures cup-for-cup. Make sure the blend contains xanthan gum for structure, or add it separately to avoid crumbly texture.
Can these lemon bar cookie cups be made vegan?
To make a vegan version, replace butter with a plant-based spread, use a flax egg in place of each egg, and ensure your sugar is vegan-friendly. The texture may differ slightly but should still be delightful.
What’s the best way to ensure the lemon filling sets properly?
Precise baking time and oven temperature are key. Bake the lemon topping until it’s just set but still slightly jiggly in the center—if you overbake, it could become dry or crack.
Final Thoughts
I genuinely hope you give this Lemon Bar Cookie Cups Recipe a try because it’s one of those treats that always brings smiles around the table. It’s simple enough to whip up on a whim yet impressive enough for special occasions. Bright, buttery, and irresistibly tangy, these little cups are a happy bite of sunshine no matter the season.
Print
Lemon Bar Cookie Cups Recipe
- Prep Time: 20 minutes
- Cook Time: 30 minutes
- Total Time: 50 minutes
- Yield: 12 cookie cups
- Category: Dessert
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Description
Lemon Bar Cookie Cups are a delightful twist on classic lemon bars, combining a soft cookie base with a tangy lemon filling baked in individual muffin cups. Perfectly portioned and beautifully presented, these vibrant citrus cookie cups offer a refreshing and sweet treat ideal for dessert or afternoon tea.
Ingredients
Cookie Base
- 1 cup unsalted butter, softened
- 3/4 cup granulated sugar
- 1 large egg
- 1 teaspoon vanilla extract
- 1 1/2 cups all-purpose flour
- 1/2 teaspoon salt
Lemon Filling
- 1 large egg
- 1/4 cup granulated sugar
- 1/2 cup all-purpose flour
- 1/4 cup fresh lemon juice
- Zest of 1 lemon
Topping
- Powdered sugar for dusting
Instructions
- Prepare the Muffin Tin and Oven: Preheat your oven to 350°F (175°C) and lightly grease a 12-cup muffin tin to prevent sticking.
- Make the Cookie Base: In a large bowl, cream the softened butter and 3/4 cup of sugar together until the mixture is light and fluffy. Beat in one egg and the vanilla extract until well combined. Stir in 1 1/2 cups of the flour and salt until you have a uniform dough.
- Form the Cookie Cups: Press about one tablespoon of the prepared dough into the bottom of each muffin cup, spreading evenly to create a solid cookie base layer.
- Bake the Cookie Base: Place the muffin tin in the preheated oven and bake for 12 minutes, or until the edges are lightly golden.
- Prepare Lemon Filling: While the cookie bases bake, whisk together the remaining egg, 1/4 cup sugar, remaining 1/2 cup flour, fresh lemon juice, and lemon zest in a bowl until smooth and well combined.
- Add Lemon Filling: Remove the muffin tin from the oven and carefully pour the lemon mixture over each partially baked cookie base, filling each cup nearly to the top.
- Bake Until Set: Return the tins to the oven and bake for an additional 15 to 18 minutes, or until the lemon filling is firm and set.
- Cool and Serve: Allow the lemon bar cookie cups to cool completely in the tin to room temperature. Before serving, dust the tops with powdered sugar for an elegant finish.
Notes
- Use fresh lemon juice to maximize the bright, fresh citrus flavor.
- Store the cookie cups in an airtight container at room temperature for up to 3 days.
- Alternatively, refrigerate to keep fresh for up to one week.
- For easier removal, you can line the muffin tin cups with paper liners or lightly grease well.

